Description
heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:5031]
Gene Synonyms
ALS19, ALS20, HNRPA1, HNRPA1L3, IBMPFD3, hnRNP A1, hnRNP-A1, hnRNPA1
Location
Chromosome 12: 54,673,977-54,680,872 forward strand.
GRCh37:CM000674.1
About this gene
This gene has 14 transcripts (splice variants), 7 paralogues and is associated with 2 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000340913.6 | HNRNPA1-002 | 1842 | 372aa | ENSP00000341826.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44909 | F8VYN5 P09651 | NM_031157.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000546500.1 | HNRNPA1-001 | 4121 | 320aa | ENSP00000448617.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41793 | F8VYN5 H0YH80 P09651 Q3MI39 Q9BSM5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000547276.1 | HNRNPA1-012 | 1539 | 267aa | ENSP00000447260.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VYN5 P09651 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000330752.8 | HNRNPA1-023 | 1294 | 307aa | ENSP00000333504.8 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VYN5 F8W6I7 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000550482.1 | HNRNPA1-018 | 832 | 191aa | ENSP00000446486.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YH80 Q3MI39 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000548688.1 | HNRNPA1-013 | 711 | 231aa | ENSP00000447782.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VYN5 F8VZ49 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000550994.1 | HNRNPA1-014 | 569 | 113aa | ENSP00000448917.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VYN5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000547708.1 | HNRNPA1-015 | 530 | 156aa | ENSP00000448229.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8W646 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000551702.1 | HNRNPA1-019 | 481 | 145aa | ENSP00000448117.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VTQ5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000547566.1 | HNRNPA1-006 | 1234 | 320aa | ENSP00000449913.1 | Nonsense mediated decay | CCDS41793 | F8VYN5 H0YH80 P09651 Q3MI39 Q9BSM5 | - | - |
| ENST00000551803.1 | HNRNPA1-022 | 372 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000551665.1 | HNRNPA1-021 | 925 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000547870.1 | HNRNPA1-016 | 920 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000551679.1 | HNRNPA1-020 | 359 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
