Human (GRCh37.p13)
Description

hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) [Source:HGNC Symbol;Acc:4910]

Gene Synonyms

BHLHE78, HIF-1A, HIF-1alpha, HIF1, HIF1-ALPHA, MOP1, PASD8, bHLHe78

Location

Chromosome 14: 62,162,231-62,214,976 forward strand.

GRCh37:CM000676.1

About this gene

This gene has 12 transcripts (splice variants), 14 paralogues and is associated with 48 phenotypes.

Show/hide columns (1 hidden)
  • Transcript ID
  • Name
  • bp
  • Protein
  • Translation ID
  • Biotype
  • CCDS
  • UniProt Match
  • RefSeq
  • Flags
Transcript IDNamebpProteinBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000539097.1HIF1A-2013468850aa
 
Protein coding
CCDS58324B4E2U7 F8W9L0 Q16665
NM_001243084.1Ensembl CanonicalGENCODE Basic
ENST00000394997.1HIF1A-0033922827aa
 
Protein coding
A8MYV6 B4E2U7 F8W9L0
-GENCODE Basic
ENST00000337138.4HIF1A-0013919826aa
 
Protein coding
CCDS9753B4E2U7 D0VY79 F8W9L0
Q16665
NM_001530.3GENCODE Basic
ENST00000323441.6HIF1A-0023555735aa
 
Protein coding
CCDS9754Q16665 NM_181054.2GENCODE Basic
ENST00000557538.1HIF1A-0043468767aa
 
Protein coding
B4E2U7 F8W9L0 -GENCODE Basic
ENST00000557206.1HIF1A-012767No protein
 
Processed transcript
---
ENST00000555014.1HIF1A-011739No protein
 
Processed transcript
---
ENST00000553999.1HIF1A-005616No protein
 
Processed transcript
---
ENST00000556237.1HIF1A-007595No protein
 
Processed transcript
---
ENST00000557446.1HIF1A-008559No protein
 
Processed transcript
---
ENST00000556827.1HIF1A-009752No protein
 
Retained intron
---
ENST00000547430.2HIF1A-010711No protein
 
Retained intron
---
Name

HIF1A (HGNC Symbol)

UniProtKB

This gene has proteins that correspond to the following UniProtKB identifiers: Q16665

CCDS

This gene is a member of the Human CCDS set: CCDS58324.1, CCDS9753.1, CCDS9754.1

Ensembl version

ENSG00000100644.12

Other assemblies

This gene maps to 61,695,513-61,748,258 in GRCh38 coordinates.

Gene type

Protein coding

Annotation method

Annotation for this gene includes both automatic annotation from Ensembl and Havana manual curation, see article.

Alternative genes

This gene corresponds to the following database identifiers:

Havana gene:
OTTHUMG00000140344 (version 2)

Basic Gene Annotations from GENCODE 19

The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

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Basic Gene Annotations from GENCODE 19

The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

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Contigs

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