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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TNPO1 ENSG00000083312

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Description

transportin 1 [Source:HGNC Symbol;Acc:6401]

Gene Synonyms

IPO2, KPNB2, MIP, MIP1, TRN

Location

Chromosome 5: 72,112,139-72,212,560 forward strand.

GRCh37:CM000667.1

About this gene

This gene has 16 transcripts (splice variants) and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000337273.5	TNPO1-001	11183	898aa	ENSP00000336712.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43329	Q92973 S4R398	NM_002270.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000454282.1	TNPO1-202	8409	848aa	ENSP00000398524.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q92973 S4R398	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506351.2	TNPO1-006	3028	890aa	ENSP00000425118.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4016	Q92973 S4R398	NM_153188.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523768.1	TNPO1-013	2632	848aa	ENSP00000428899.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q92973 S4R398	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000447967.2	TNPO1-201	863	128aa	ENSP00000415164.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DSC0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000605210.1	TNPO1-014	752	193aa	ENSP00000474059.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R398	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000520850.1	TNPO1-011	863	136aa	ENSP00000430312.1	Nonsense mediated decay		B4DSC0 E7EW37	-	-
ENST00000513944.1	TNPO1-002	569	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000508762.1	TNPO1-003	564	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518279.1	TNPO1-012	563	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000515483.1	TNPO1-010	549	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505082.1	TNPO1-004	543	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000509030.1	TNPO1-007	490	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000511754.1	TNPO1-009	433	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506528.1	TNPO1-008	422	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503084.1	TNPO1-005	623	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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