Description
STE20-related kinase adaptor alpha [Source:HGNC Symbol;Acc:30172]
Gene Synonyms
LYK5, NY-BR-96, PMSE, STRAD, Stlk
Location
Chromosome 17: 61,780,192-61,819,330 reverse strand.
GRCh37:CM000679.1
About this gene
This gene has 23 transcripts (splice variants), 3 paralogues and is associated with 3 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000336174.6 | STRADA-001 | 2143 | 431aa | ENSP00000336655.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32703 | J3QKR7 J3QKU4 J3QRC1 Q7RTN6 | NM_001003787.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000245865.5 | STRADA-005 | 2962 | 234aa | ENSP00000245865.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QKR7 J3QRC1 Q86YC8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000392950.4 | STRADA-003 | 2762 | 348aa | ENSP00000376677.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11642 | J3KSA2 J3QKR7 J3QRC1 Q7RTN6 | NM_153335.5 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000375840.4 | STRADA-007 | 2121 | 373aa | ENSP00000365000.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42367 | J3QKR7 J3QRC1 Q7RTN6 | NM_001003788.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000447001.3 | STRADA-004 | 1398 | 299aa | ENSP00000398841.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54156 | Q7RTN6 | NM_001165970.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000579340.1 | STRADA-016 | 1168 | 173aa | ENSP00000462530.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KSK5 J3QKR7 J3QRC1 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000582137.1 | STRADA-006 | 1159 | 314aa | ENSP00000462922.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58585 | J3QKR7 J3QRC1 Q7RTN6 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000582026.1 | STRADA-022 | 961 | 55aa | ENSP00000464213.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000578008.1 | STRADA-020 | 798 | 167aa | ENSP00000464547.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QS66 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000579549.1 | STRADA-011 | 604 | 72aa | ENSP00000462384.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KSA2 J3QRC1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000582030.1 | STRADA-013 | 582 | 50aa | ENSP00000464139.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QRC1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000580338.1 | STRADA-009 | 563 | 78aa | ENSP00000463203.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QKR7 J3QRC1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000584110.1 | STRADA-012 | 563 | 10aa | ENSP00000462496.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000578801.1 | STRADA-019 | 560 | 131aa | ENSP00000463872.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QQS3 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000580288.1 | STRADA-010 | 525 | 45aa | ENSP00000463238.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QKU4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000581243.1 | STRADA-015 | 938 | 40aa | ENSP00000464085.1 | Nonsense mediated decay | J3QR78 | - | - | |
| ENST00000580039.1 | STRADA-023 | 1046 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000581505.1 | STRADA-024 | 535 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000579350.1 | STRADA-018 | 470 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000583085.1 | STRADA-008 | 3685 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000577375.1 | STRADA-021 | 696 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000579318.1 | STRADA-017 | 623 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000578507.1 | STRADA-014 | 580 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
