Gene: ZACN ENSG00000186919

Description

zinc activated ligand-gated ion channel [Source:HGNC Symbol;Acc:29504]

Gene Synonyms

L2, LGICZ, LGICZ1, ZAC, ZAC1

Location

Chromosome 17: 74,068,042-74,079,747 forward strand.

GRCh37:CM000679.1

About this gene

This gene has 7 transcripts (splice variants) and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000334586.5	ZACN-001	1335	412aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11740	Q401N2	NM_180990.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000392503.2	ZACN-201	464	126aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q401N2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000425015.1	ZACN-002	2167	266aa	Nonsense mediated decay		Q401N2	-	-
ENST00000421794.1	ZACN-003	1291	126aa	Nonsense mediated decay		Q401N2	-	-
ENST00000590045.1	ZACN-007	2651	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000591500.1	ZACN-006	556	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000524242.1	ZACN-004	509	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Name

ZACN (HGNC Symbol)

UniProtKB

This gene has proteins that correspond to the following UniProtKB identifiers: Q401N2

CCDS

This gene is a member of the Human CCDS set: CCDS11740.2

Ensembl version

ENSG00000186919.8

Other assemblies

This gene maps to 76,071,961-76,083,666 in GRCh38 coordinates.

Gene type

Protein coding

Annotation method

Annotation for this gene includes both automatic annotation from Ensembl and Havana manual curation, see article.

Alternative genes

This gene corresponds to the following database identifiers:

Havana gene:	OTTHUMG00000157186 (version 4)

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Gene: ZACN ENSG00000186919

Summary