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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: HOMER1 ENSG00000152413

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Description

homer homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:17512]

Gene Synonyms

HOMER, HOMER-1B, HOMER1A, HOMER1B, HOMER1C, SYN47, Ves-1

Location

Chromosome 5: 78,668,459-78,810,040 reverse strand.

GRCh37:CM000667.1

About this gene

This gene has 5 transcripts (splice variants), 267 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000334082.6	HOMER1-001	5881	354aa	ENSP00000334382.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43335	Q86YM7	NM_004272.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000508576.1	HOMER1-004	815	177aa	ENSP00000426651.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS64189	Q86YM7	NM_001277078.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000282260.6	HOMER1-003	774	224aa	ENSP00000282260.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS64188	Q86YM7	NM_001277077.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000535690.1	HOMER1-201	642	180aa	ENSP00000441587.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86YM6	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000460741.1	HOMER1-002	755	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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