Description
legumain [Source:HGNC Symbol;Acc:9472]
Gene Synonyms
AEP, LGMN1, PRSC1
Location
Chromosome 14: 93,170,152-93,215,047 reverse strand.
GRCh37:CM000676.1
About this gene
This gene has 19 transcripts (splice variants) and 1 paralogue.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000393218.2 | LGMN-005 | 2115 | 433aa | ENSP00000376911.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS9904 | G3V4H2 G3V4P5 G3V5B2 Q53XC6 Q96CY7 Q99538 | NM_001008530.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000334869.4 | LGMN-001 | 2055 | 433aa | ENSP00000334052.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS9904 | G3V4H2 G3V4P5 G3V5B2 Q53XC6 Q96CY7 Q99538 | NM_005606.6 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000557434.1 | LGMN-002 | 1797 | 376aa | ENSP00000452572.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V4H2 G3V4P5 G3V5B2 Q86TV3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000555699.1 | LGMN-004 | 1728 | 372aa | ENSP00000451861.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V4H2 G3V4P5 G3V5B2 Q86TV2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000554080.1 | LGMN-010 | 588 | 57aa | ENSP00000452268.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V4H2 G3V5B2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000553802.1 | LGMN-012 | 573 | 135aa | ENSP00000450854.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V2T4 G3V4H2 G3V5B2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000554919.1 | LGMN-015 | 546 | 78aa | ENSP00000451916.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V4H2 G3V4P5 G3V5B2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000555169.1 | LGMN-020 | 543 | 91aa | ENSP00000451854.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000554397.1 | LGMN-011 | 533 | 78aa | ENSP00000450677.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V4H2 G3V4P5 G3V5B2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000553371.1 | LGMN-009 | 495 | 57aa | ENSP00000451797.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V4H2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000553918.1 | LGMN-018 | 283 | 19aa | ENSP00000450619.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000557609.1 | LGMN-007 | 1832 | 117aa | ENSP00000451507.1 | Nonsense mediated decay | G3V3Z4 G3V4H2 G3V4P5 G3V5B2 | - | - | |
| ENST00000556097.1 | LGMN-019 | 1054 | 223aa | ENSP00000451746.1 | Nonsense mediated decay | G3V4E4 G3V4H2 G3V4P5 G3V5B2 | - | - | |
| ENST00000554189.1 | LGMN-013 | 570 | 48aa | ENSP00000450483.1 | Nonsense mediated decay | G3V263 | - | - | |
| ENST00000557034.1 | LGMN-014 | 565 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000557694.1 | LGMN-017 | 949 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000557725.1 | LGMN-022 | 741 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000557315.1 | LGMN-016 | 556 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000556790.1 | LGMN-021 | 352 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
