Description
basigin (Ok blood group) [Source:HGNC Symbol;Acc:1116]
Gene Synonyms
5F7, CD147, EMMPRIN, M6, OK, TCSF
Location
Chromosome 19: 571,297-583,493 forward strand.
GRCh37:CM000681.1
About this gene
This gene has 12 transcripts (splice variants), 2 paralogues and is associated with 1 phenotype.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000333511.3 | BSG-001 | 1974 | 385aa | ENSP00000333769.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12033 | P35613 R4GMX5 R4GN83 | NM_001728.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000545507.2 | BSG-006 | 1767 | 176aa | ENSP00000473664.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58635 | P35613 R4GMX5 R4GN83 | NM_198590.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000346916.4 | BSG-002 | 1618 | 205aa | ENSP00000344707.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12032 | P35613 R4GMX5 R4GN83 | NM_198591.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000353555.4 | BSG-003 | 1616 | 269aa | ENSP00000343809.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12034 | B4DY23 P35613 Q54A51 R4GMX5 R4GN83 | NM_198589.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000573784.1 | BSG-008 | 559 | 84aa | ENSP00000473393.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | R4GMX5 R4GN83 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000573216.1 | BSG-007 | 545 | 160aa | ENSP00000458665.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L192 R4GN83 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000576984.1 | BSG-010 | 536 | 52aa | ENSP00000473528.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | R4GN83 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000574970.1 | BSG-009 | 567 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000571735.1 | BSG-005 | 2143 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000576925.2 | BSG-011 | 610 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000572899.1 | BSG-012 | 580 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000590218.1 | BSG-013 | 545 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
