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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: GJC1 ENSG00000182963

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Description

gap junction protein, gamma 1, 45kDa [Source:HGNC Symbol;Acc:4280]

Gene Synonyms

CX45, GJA7

Location

Chromosome 17: 42,875,816-42,908,184 reverse strand.

GRCh37:CM000679.1

About this gene

This gene has 9 transcripts (splice variants) and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000426548.1	GJC1-201	7640	396aa	ENSP00000411528.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11487	K7EM78 K7ENT9 K7EQ14 P36383 Q5H9P2	NM_005497.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000330514.4	GJC1-003	3295	396aa	ENSP00000333193.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11487	K7EM78 K7ENT9 K7EQ14 P36383 Q5H9P2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587113.1	GJC1-009	3226	260aa	ENSP00000468716.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5H9P2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000592524.1	GJC1-002	1837	396aa	ENSP00000467201.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11487	K7EM78 K7ENT9 K7EQ14 P36383 Q5H9P2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000590758.1	GJC1-001	1797	396aa	ENSP00000466339.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11487	K7EM78 K7ENT9 K7EQ14 P36383 Q5H9P2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591424.1	GJC1-004	586	103aa	ENSP00000466392.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EM78 K7ENT9 K7EQ14	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000587239.1	GJC1-007	572	72aa	ENSP00000467626.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ENT9 K7EQ14	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000586347.1	GJC1-008	545	113aa	ENSP00000468258.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000586267.1	GJC1-005	478	70aa	ENSP00000467090.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ENT9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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