Description
SMAD family member 3 [Source:HGNC Symbol;Acc:6769]
Gene Synonyms
HSPC193, HsT17436, JV15-2, LDS1C, LDS3, MADH3
Location
Chromosome 15: 67,356,101-67,487,533 forward strand.
GRCh37:CM000677.1
About this gene
This gene has 15 transcripts (splice variants), 7 paralogues and is associated with 72 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000327367.4 | SMAD3-001 | 6247 | 425aa | ENSP00000332973.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10222 | H0YKE2 H0YL71 H0YMP2 H0YNV1 H3BP09 P84022 Q68DS8 | NM_005902.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000540846.2 | SMAD3-002 | 1567 | 320aa | ENSP00000437757.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53950 | H0YKE2 H0YL71 H0YMP2 H0YNV1 H3BP09 P84022 Q68DS8 | NM_001145102.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000439724.3 | SMAD3-003 | 1530 | 381aa | ENSP00000401133.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45288 | H0YKE2 H0YL71 H0YMP2 H0YNV1 H3BP09 P84022 Q68DS8 | NM_001145103.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000537194.2 | SMAD3-004 | 1147 | 230aa | ENSP00000445348.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53951 | H0YKE2 H0YNV1 P84022 Q68DS8 | NM_001145104.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000558894.1 | SMAD3-013 | 797 | 213aa | ENSP00000458060.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YL71 H0YMP2 H0YNV1 H3BP09 H3BVD1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000560424.1 | SMAD3-007 | 775 | 156aa | ENSP00000455540.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q68DS8 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000558739.1 | SMAD3-014 | 586 | 63aa | ENSP00000453684.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YMP2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000559092.1 | SMAD3-015 | 584 | 96aa | ENSP00000453788.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YMY0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000559460.1 | SMAD3-012 | 568 | 92aa | ENSP00000453082.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YL71 H0YMP2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000558428.1 | SMAD3-009 | 554 | 84aa | ENSP00000454165.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YNV1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000558827.1 | SMAD3-008 | 552 | 112aa | ENSP00000452767.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YKE2 H0YNV1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000560175.1 | SMAD3-016 | 542 | 114aa | ENSP00000455095.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YL71 H0YMP2 H3BP09 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000558763.1 | SMAD3-006 | 1957 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000560402.1 | SMAD3-011 | 590 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000559937.1 | SMAD3-010 | 579 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
