Description
protein tyrosine phosphatase, receptor type, M [Source:HGNC Symbol;Acc:9675]
Gene Synonyms
PTPRL1, R-PTP-MU, RPTPM, RPTPU, hR-PTPu
Location
Chromosome 18: 7,566,780-8,406,859 forward strand.
GRCh37:CM000680.1
About this gene
This gene has 16 transcripts (splice variants) and 11 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000580170.1 | PTPRM-012 | 5941 | 1465aa | ENSP00000463325.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58613 | P28827 Q49AC9 | NM_001105244.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000332175.8 | PTPRM-001 | 6095 | 1452aa | ENSP00000331418.8 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11840 | E7EPS8 P28827 Q49AC9 | NM_002845.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000400053.4 | PTPRM-003 | 5292 | 1390aa | ENSP00000382927.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EPS8 Q49AC9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000444013.1 | PTPRM-202 | 4414 | 1239aa | ENSP00000387608.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EVX9 J3QLI4 Q49AC9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000400060.4 | PTPRM-201 | 4401 | 1466aa | ENSP00000382933.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8WA38 Q49AC9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000583289.1 | PTPRM-008 | 792 | 264aa | ENSP00000462176.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000583153.1 | PTPRM-016 | 713 | 238aa | ENSP00000462809.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000577468.1 | PTPRM-010 | 701 | 207aa | ENSP00000464128.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QRB4 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000578916.1 | PTPRM-004 | 604 | 173aa | ENSP00000463558.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QLI4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000578571.1 | PTPRM-006 | 1106 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000580949.1 | PTPRM-017 | 687 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000580838.1 | PTPRM-015 | 676 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000578600.1 | PTPRM-005 | 578 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000578698.1 | PTPRM-007 | 486 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000578093.1 | PTPRM-009 | 464 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000577827.1 | PTPRM-013 | 4640 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
