Description
brevican [Source:HGNC Symbol;Acc:23059]
Gene Synonyms
BEHAB, CSPG7, MGC13038
Location
Chromosome 1: 156,611,182-156,629,324 forward strand.
GRCh37:CM000663.1
About this gene
This gene has 8 transcripts (splice variants) and 8 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000329117.5 | BCAN-001 | 3466 | 911aa | ENSP00000331210.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS1149 | Q59F90 Q5T3I7 Q5T3I8 Q96GW7 Q9NT67 | NM_021948.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000361588.5 | BCAN-002 | 2563 | 671aa | ENSP00000354925.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS1150 | Q5T3I7 Q5T3I8 Q96GW7 | NM_198427.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000424639.1 | BCAN-006 | 844 | 231aa | ENSP00000401709.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5T3I6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000457777.2 | BCAN-007 | 807 | 213aa | ENSP00000389898.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5T3I7 Q5T3I8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000441358.1 | BCAN-008 | 600 | 145aa | ENSP00000392731.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5T3I8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000479949.1 | BCAN-004 | 1705 | 196aa | ENSP00000476509.1 | Nonsense mediated decay | Q5T3I8 | - | - | |
| ENST00000491823.1 | BCAN-005 | 790 | 26aa | ENSP00000476259.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000496038.1 | BCAN-003 | 1871 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
