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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: B4GALNT4 ENSG00000182272

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Description

beta-1,4-N-acetyl-galactosaminyl transferase 4 [Source:HGNC Symbol;Acc:26315]

Gene Synonyms

FLJ25045, NGalNAc-T1

Location

Chromosome 11: 369,796-382,116 forward strand.

GRCh37:CM000673.1

About this gene

This gene has 5 transcripts (splice variants) and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000329962.6	B4GALNT4-001	3444	1039aa	ENSP00000328277.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7694	Q76KP1	NM_178537.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534778.1	B4GALNT4-005	876	53aa	ENSP00000432372.1	Nonsense mediated decay		H0YCU7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000526584.1	B4GALNT4-004	424	26aa	ENSP00000434463.1	Nonsense mediated decay		H0YDW6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000524443.1	B4GALNT4-003	420	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530717.1	B4GALNT4-002	409	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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