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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NCBP2 ENSG00000114503

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Description

nuclear cap binding protein subunit 2, 20kDa [Source:HGNC Symbol;Acc:7659]

Gene Synonyms

CBC2, CBP20, Cbc2, NIP1

Location

Chromosome 3: 196,662,273-196,669,468 reverse strand.

GRCh37:CM000665.1

About this gene

This gene has 13 transcripts (splice variants) and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000321256.5	NCBP2-001	2169	156aa	ENSP00000326806.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3323	B3KSB0 C9JQX9 P52298	NM_007362.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000447325.1	NCBP2-007	2216	86aa	ENSP00000413518.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KSB0 C9JQX9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427641.2	NCBP2-004	1946	103aa	ENSP00000397619.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46986	E9PAR5	NM_001042540.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452404.2	NCBP2-006	1133	138aa	ENSP00000412785.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KSB0 C9JQX9 P52298	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422610.1	NCBP2-011	676	86aa	ENSP00000394105.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KSB0 C9JQX9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000411704.1	NCBP2-010	564	83aa	ENSP00000389315.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JQX9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000455953.1	NCBP2-012	548	15aa	ENSP00000402549.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000428425.1	NCBP2-005	2220	54aa	ENSP00000414122.1	Nonsense mediated decay		F8WE41	-	-
ENST00000467803.1	NCBP2-014	771	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463783.1	NCBP2-002	4161	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000468923.1	NCBP2-008	1096	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000482976.1	NCBP2-009	669	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000479647.1	NCBP2-013	552	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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