Description
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:HGNC Symbol;Acc:16770]
Gene Synonyms
FLJ11598, KIAA1479
Location
Chromosome 15: 47,476,298-48,066,420 forward strand.
GRCh37:CM000677.1
About this gene
This gene has 20 transcripts (splice variants) and 6 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000316364.5 | SEMA6D-004 | 6099 | 1073aa | ENSP00000324857.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32225 | H0YL82 H0YMA6 H0YMV0 Q8NFY4 Q9HAH9 | NM_153618.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000389433.2 | SEMA6D-203 | 6039 | 1054aa | ENSP00000374084.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YL82 H0YMA6 H0YMV0 Q8NFY4 Q9HAH9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000558014.1 | SEMA6D-001 | 6028 | 1011aa | ENSP00000452815.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32224 | H0YL82 H0YMA6 H0YMV0 Q8NFY4 Q9HAH9 | NM_001198999.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000389432.2 | SEMA6D-202 | 5967 | 1030aa | ENSP00000374083.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YL82 H0YMA6 H0YMV0 Q8NFY4 Q9HAH9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000354744.4 | SEMA6D-005 | 5931 | 1017aa | ENSP00000346786.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32226 | H0YL82 H0YMA6 H0YMV0 Q8NFY4 Q9HAH9 | NM_153617.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000358066.4 | SEMA6D-006 | 5913 | 1011aa | ENSP00000350770.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32224 | H0YL82 H0YMA6 H0YMV0 Q8NFY4 Q9HAH9 | NM_020858.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000355997.3 | SEMA6D-201 | 5906 | 597aa | ENSP00000348276.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32228 | A6NM95 H0YL82 H0YMA6 H0YMV0 Q9HAH9 | NM_153619.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000389428.3 | SEMA6D-007 | 5874 | 998aa | ENSP00000374079.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32227 | H0YL82 H0YMA6 H0YMV0 Q8NFY4 Q9H9K4 Q9HAH9 | NM_153616.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000537942.1 | SEMA6D-204 | 5712 | 1011aa | ENSP00000442040.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32224 | H0YL82 H0YMA6 H0YMV0 Q8NFY4 Q9HAH9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000558816.1 | SEMA6D-008 | 4419 | 597aa | ENSP00000453661.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32228 | A6NM95 H0YL82 H0YMA6 H0YMV0 Q9HAH9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000536845.2 | SEMA6D-002 | 3754 | 1073aa | ENSP00000446152.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32225 | H0YL82 H0YMA6 H0YMV0 Q8NFY4 Q9HAH9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000389425.3 | SEMA6D-003 | 2318 | 476aa | ENSP00000374076.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32229 | H0YL82 H0YMA6 H0YMV0 Q8NFY4 Q9HAH9 | NM_024966.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000559196.1 | SEMA6D-013 | 734 | 219aa | ENSP00000453755.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YL82 H0YMA6 H0YMV0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000560006.1 | SEMA6D-016 | 592 | 198aa | ENSP00000453689.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000561133.1 | SEMA6D-012 | 588 | 148aa | ENSP00000453530.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YL82 H0YMA6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000559064.1 | SEMA6D-015 | 580 | 54aa | ENSP00000453518.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000559184.1 | SEMA6D-009 | 545 | 22aa | ENSP00000453097.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YL82 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000560636.1 | SEMA6D-010 | 479 | 1aa | ENSP00000453420.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000558431.1 | SEMA6D-014 | 595 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000561106.1 | SEMA6D-011 | 530 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
