Description
polynucleotide kinase 3'-phosphatase [Source:HGNC Symbol;Acc:9154]
Gene Synonyms
EIEE10, MCSZ, PNK
Location
Chromosome 19: 50,364,461-50,371,166 reverse strand.
GRCh37:CM000681.1
About this gene
This gene has 15 transcripts (splice variants), 1 paralogue and is associated with 6 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000322344.3 | PNKP-001 | 1720 | 521aa | ENSP00000323511.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12783 | M0QYI1 M0R000 Q96T60 | NM_007254.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000596014.1 | PNKP-004 | 1665 | 521aa | ENSP00000472300.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12783 | M0QYI1 M0R000 Q96T60 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000600573.1 | PNKP-002 | 1602 | 490aa | ENSP00000469826.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M0QYH2 M0QYI1 M0R000 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000600910.1 | PNKP-003 | 1565 | 455aa | ENSP00000473137.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M0QYI1 M0R000 M0R3C8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000596726.1 | PNKP-008 | 518 | 30aa | ENSP00000470887.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M0R000 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000599543.1 | PNKP-007 | 442 | 66aa | ENSP00000469848.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M0QYI1 M0R000 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000597965.1 | PNKP-016 | 349 | 56aa | ENSP00000471097.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000593946.1 | PNKP-005 | 1689 | 51aa | ENSP00000468896.1 | Nonsense mediated decay | M0QX49 M0R000 | - | - | |
| ENST00000598020.1 | PNKP-010 | 534 | 51aa | ENSP00000470346.1 | Nonsense mediated decay | M0QX49 M0R000 | - | - | |
| ENST00000595792.1 | PNKP-009 | 645 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000594661.1 | PNKP-006 | 2102 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000593706.1 | PNKP-011 | 788 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000601816.1 | PNKP-013 | 608 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000599454.1 | PNKP-014 | 529 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000595081.1 | PNKP-015 | 513 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
