Gene: EXOSC3 ENSG00000107371

Description

exosome component 3 [Source:HGNC Symbol;Acc:17944]

Gene Synonyms

CGI-102, PCH1B, RP11-3J10.8, RRP40, Rrp40p, bA3J10.7, hRrp-40, hRrp40p, p10

Location

Chromosome 9: 37,766,975-37,801,434 reverse strand.

GRCh37:CM000671.1

About this gene

This gene has 8 transcripts (splice variants) and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000327304.5	EXOSC3-001	1806	275aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35016	Q9NQT5	NM_016042.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000396521.3	EXOSC3-002	768	164aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43805	Q9NQT5 Q9NYS3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000465229.1	EXOSC3-005	1625	164aa	Nonsense mediated decay	CCDS43805	Q9NQT5 Q9NYS3	-	-
ENST00000490516.1	EXOSC3-004	773	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489414.1	EXOSC3-009	535	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482614.1	EXOSC3-008	462	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465860.1	EXOSC3-007	509	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000496910.1	EXOSC3-006	217	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Name

EXOSC3 (HGNC Symbol)

UniProtKB

This gene has proteins that correspond to the following UniProtKB identifiers: Q9NQT5

CCDS

This gene is a member of the Human CCDS set: CCDS35016.1, CCDS43805.1

Ensembl version

ENSG00000107371.8

Other assemblies

This gene maps to 37,766,978-37,801,437 in GRCh38 coordinates.

Gene type

Protein coding

Annotation method

Annotation for this gene includes both automatic annotation from Ensembl and Havana manual curation, see article.

Alternative genes

This gene corresponds to the following database identifiers:

Havana gene:	OTTHUMG00000019932 (version 3)

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Gene: EXOSC3 ENSG00000107371

Summary