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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: EBF1 ENSG00000164330

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Description

early B-cell factor 1 [Source:HGNC Symbol;Acc:3126]

Gene Synonyms

COE1, EBF, O/E-1, OLF1

Location

Chromosome 5: 158,122,928-158,526,769 reverse strand.

GRCh37:CM000667.1

About this gene

This gene has 10 transcripts (splice variants), 3 paralogues and is associated with 63 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000313708.6	EBF1-001	5250	591aa	ENSP00000322898.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4343	Q9UH73	NM_024007.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000380654.4	EBF1-002	2345	560aa	ENSP00000370029.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9UH73	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000517373.1	EBF1-006	2277	523aa	ENSP00000428020.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFQ1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000518836.1	EBF1-010	5127	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000523464.1	EBF1-008	766	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518323.1	EBF1-007	602	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000523315.1	EBF1-004	490	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000519739.1	EBF1-009	4735	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000519890.1	EBF1-005	4695	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000522192.1	EBF1-003	1911	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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