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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: VNN2 ENSG00000112303

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Description

vanin 2 [Source:HGNC Symbol;Acc:12706]

Gene Synonyms

FOAP-4, GPI-80

Location

Chromosome 6: 133,065,009-133,084,598 reverse strand.

GRCh37:CM000668.1

About this gene

This gene has 16 transcripts (splice variants), 125 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000326499.6	VNN2-001	2118	520aa	ENSP00000322276.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5161	E9PK31 E9PL76 E9PRD9 O95498	NM_004665.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000525270.1	VNN2-002	1608	467aa	ENSP00000436822.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5162	E9PRD9 O95498	NM_078488.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000525289.1	VNN2-006	900	299aa	ENSP00000436935.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56451	E9PK31 E9PL76 E9PRD9 O95498	NM_001242350.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000524919.1	VNN2-011	594	166aa	ENSP00000431451.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PK31 E9PL76 E9PRD9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000530536.1	VNN2-012	587	102aa	ENSP00000434210.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PRD9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000532012.1	VNN2-013	543	101aa	ENSP00000431680.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PK31	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000392389.2	VNN2-003	1920	290aa	ENSP00000376190.2	Nonsense mediated decay		E9PK31 E9PL76 E9PRD9 J3QT03	-	-
ENST00000422400.2	VNN2-009	1873	216aa	ENSP00000406536.2	Nonsense mediated decay		E9PK31 E9PL76 E9PRD9 J3KQQ7	-	-
ENST00000418593.2	VNN2-010	1781	219aa	ENSP00000387572.2	Nonsense mediated decay		E9PK31 E9PL76 E9PRD9 J3KQ55	-	-
ENST00000525674.1	VNN2-005	1274	195aa	ENSP00000436863.1	Nonsense mediated decay		E9PK31 E9PL76 E9PRD9 O95498	-	-
ENST00000533835.1	VNN2-004	1123	184aa	ENSP00000432516.1	Nonsense mediated decay		B4DQB2 E9PK31 E9PL76 E9PQ75 E9PRD9	-	-
ENST00000532053.1	VNN2-007	1034	192aa	ENSP00000434077.1	Nonsense mediated decay		E9PK31 E9PL76 E9PRD9 O95498	-	-
ENST00000528801.1	VNN2-008	707	119aa	ENSP00000433285.1	Nonsense mediated decay		E9PK31 E9PLK5	-	-
ENST00000531279.1	VNN2-014	571	131aa	ENSP00000432582.1	Nonsense mediated decay		E9PQ75 E9PRD9	-	-
ENST00000526192.1	VNN2-015	758	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000526157.1	VNN2-016	658	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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