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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: FAXDC2 ENSG00000170271

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Description

fatty acid hydroxylase domain containing 2 [Source:HGNC Symbol;Acc:1334]

Gene Synonyms

C5orf4, FLJ13758

Location

Chromosome 5: 154,198,051-154,238,812 reverse strand.

GRCh37:CM000667.1

About this gene

This gene has 16 transcripts (splice variants) and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000326080.5	FAXDC2-001	3251	333aa	ENSP00000320604.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43390	B4DIE1 E5RH84 E5RK01 Q96IV6	NM_032385.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000517938.1	FAXDC2-002	1203	310aa	ENSP00000430286.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DIE1 E5RH84	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000519501.1	FAXDC2-008	815	146aa	ENSP00000429837.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RH84	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000520461.1	FAXDC2-006	603	31aa	ENSP00000431015.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RK01	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000520968.1	FAXDC2-014	558	102aa	ENSP00000429406.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RIK6 E5RK01	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000518651.1	FAXDC2-015	536	114aa	ENSP00000429876.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RH66	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000520581.1	FAXDC2-013	868	60aa	ENSP00000431084.1	Nonsense mediated decay		E5RJQ9	-	-
ENST00000522825.1	FAXDC2-010	625	43aa	ENSP00000429004.1	Nonsense mediated decay		E5RJN8	-	-
ENST00000524363.1	FAXDC2-016	584	99aa	ENSP00000428834.1	Nonsense mediated decay		E5RFJ7	-	-
ENST00000521518.1	FAXDC2-012	575	50aa	ENSP00000428992.1	Nonsense mediated decay		E5RK01 E5RK16	-	-
ENST00000523997.1	FAXDC2-007	530	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000423554.1	FAXDC2-004	3817	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000524250.1	FAXDC2-005	3105	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000517448.1	FAXDC2-003	948	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000519258.1	FAXDC2-011	587	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000517874.1	FAXDC2-009	569	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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