Description
enhancer of mRNA decapping 3 [Source:HGNC Symbol;Acc:26114]
Gene Synonyms
FLJ21128, LSM16, YJDC, YJEFN2, hYjeF_N2-15q23
Location
Chromosome 15: 74,922,899-74,988,633 reverse strand.
GRCh37:CM000677.1
About this gene
This gene has 18 transcripts (splice variants) and is associated with 1 phenotype.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000315127.4 | EDC3-001 | 3763 | 508aa | ENSP00000320503.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10267 | H3BMB8 H3BN89 H3BPW9 H3BQ37 H3BQA1 H3BQP5 H3BSQ0 H3BTF8 H3BTH0 H3BU87 Q96F86 | NM_025083.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000426797.3 | EDC3-003 | 2093 | 508aa | ENSP00000401343.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10267 | H3BMB8 H3BN89 H3BPW9 H3BQ37 H3BQA1 H3BQP5 H3BSQ0 H3BTF8 H3BTH0 H3BU87 Q96F86 | NM_001142443.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000568176.1 | EDC3-004 | 1825 | 508aa | ENSP00000455580.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10267 | H3BMB8 H3BN89 H3BPW9 H3BQ37 H3BQA1 H3BQP5 H3BSQ0 H3BTF8 H3BTH0 H3BU87 Q96F86 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000563009.1 | EDC3-016 | 967 | 253aa | ENSP00000455503.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BMB8 H3BPW9 H3BQ37 H3BQA1 H3BQP5 H3BTF8 H3BTH0 H3BU87 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000562174.1 | EDC3-005 | 761 | 213aa | ENSP00000455393.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000566243.1 | EDC3-017 | 711 | 131aa | ENSP00000457523.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BMB8 H3BQA1 H3BQP5 H3BTF8 H3BTH0 H3BU87 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000566219.1 | EDC3-009 | 688 | 163aa | ENSP00000456805.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BSQ0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000569561.1 | EDC3-010 | 658 | 177aa | ENSP00000455589.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BMB8 H3BQ37 H3BQA1 H3BQP5 H3BTF8 H3BTH0 H3BU87 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000563292.1 | EDC3-014 | 588 | 92aa | ENSP00000454317.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BMB8 H3BQA1 H3BTF8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000566828.1 | EDC3-018 | 574 | 123aa | ENSP00000455870.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BMB8 H3BQA1 H3BQP5 H3BTF8 H3BTH0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000570138.1 | EDC3-013 | 573 | 101aa | ENSP00000457170.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BMB8 H3BQA1 H3BTF8 H3BTH0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000569606.1 | EDC3-006 | 533 | 95aa | ENSP00000454736.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BN89 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000566119.1 | EDC3-012 | 479 | 31aa | ENSP00000455682.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BQA1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000567813.1 | EDC3-015 | 471 | 54aa | ENSP00000457156.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BQA1 H3BTF8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000562974.1 | EDC3-007 | 204 | 68aa | ENSP00000457128.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BTD6 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000565602.1 | EDC3-002 | 1862 | 57aa | ENSP00000454885.1 | Nonsense mediated decay | H3BNJ7 H3BQA1 H3BTF8 | - | - | |
| ENST00000562047.1 | EDC3-008 | 559 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000569007.1 | EDC3-011 | 379 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
