Description
Tubulin beta-3 chain [Source:UniProtKB/Swiss-Prot;Acc:Q13509]
Gene Synonyms
CDCBM, CDCBM1, CFEOM3A, TUBB4, beta-4
Location
Chromosome 16: 89,987,800-90,005,169 forward strand.
GRCh37:CM000678.1
About this gene
This gene has 15 transcripts (splice variants), 12 paralogues and is associated with 5 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000315491.7 | TUBB3-001 | 1769 | 450aa | ENSP00000320295.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10988 | A8K854 G3V2A3 G3V3J6 G3V542 Q13509 Q3ZCR3 Q9BV28 | NM_006086.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000304984.5 | TUBB3-201 | 3715 | 378aa | ENSP00000302777.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS56012 | A8K854 G3V2A3 G3V542 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000554444.1 | TUBB3-002 | 1978 | 378aa | ENSP00000451617.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS56012 | A8K854 G3V2A3 G3V542 | NM_001197181.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000554336.1 | TUBB3-010 | 903 | 118aa | ENSP00000450822.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V2R8 G3V3J6 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000555810.1 | TUBB3-004 | 767 | 189aa | ENSP00000450538.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V2A3 G3V542 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000553967.1 | TUBB3-011 | 736 | 164aa | ENSP00000450765.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V2N6 G3V3J6 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000555576.1 | TUBB3-005 | 572 | 97aa | ENSP00000452554.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V3J6 G3V5W4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000556565.1 | TUBB3-003 | 566 | 46aa | ENSP00000452166.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V542 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000555609.1 | TUBB3-013 | 1855 | 55aa | ENSP00000451276.1 | Nonsense mediated decay | G3V3J6 | - | - | |
| ENST00000556536.1 | TUBB3-012 | 925 | 148aa | ENSP00000451378.1 | Nonsense mediated decay | G3V3J6 G3V3R4 | - | - | |
| ENST00000557262.1 | TUBB3-006 | 888 | 51aa | ENSP00000451985.1 | Nonsense mediated decay | G3V4U2 | - | - | |
| ENST00000557490.1 | TUBB3-014 | 806 | 87aa | ENSP00000451465.1 | Nonsense mediated decay | G3V3J6 G3V3W7 | - | - | |
| ENST00000553656.1 | TUBB3-007 | 550 | 51aa | ENSP00000452001.1 | Nonsense mediated decay | G3V4U2 | - | - | |
| ENST00000554116.1 | TUBB3-008 | 542 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000554927.1 | TUBB3-009 | 561 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
