Description
protein arginine methyltransferase 5 [Source:HGNC Symbol;Acc:10894]
Gene Synonyms
HRMT1L5, IBP72, JBP1, SKB1, SKB1Hs
Location
Chromosome 14: 23,389,720-23,398,794 reverse strand.
GRCh37:CM000676.1
About this gene
This gene has 28 transcripts (splice variants).
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000324366.8 | PRMT5-003 | 2531 | 637aa | ENSP00000319169.8 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS9579 | B4DV00 G3V5L5 G3V5T6 O14744 | NM_006109.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000397441.2 | PRMT5-007 | 2418 | 620aa | ENSP00000380583.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41922 | B4DV00 G3V5L5 G3V5T6 O14744 | NM_001039619.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000216350.8 | PRMT5-008 | 2271 | 576aa | ENSP00000216350.8 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS61394 | B4DX49 G3V5T6 | NM_001282953.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000538452.1 | PRMT5-201 | 1933 | 531aa | ENSP00000444915.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DV00 G3V5T6 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000397440.4 | PRMT5-004 | 1907 | 466aa | ENSP00000380582.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS61395 | A8MTP3 | NM_001282956.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000553897.1 | PRMT5-010 | 1857 | 593aa | ENSP00000452555.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS61396 | G3V5T6 G3V5W5 | NM_001282955.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000555530.1 | PRMT5-020 | 837 | 279aa | ENSP00000452409.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V5T6 H0YJX6 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000555454.1 | PRMT5-021 | 771 | 177aa | ENSP00000451245.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YJD3 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000454731.2 | PRMT5-022 | 617 | 179aa | ENSP00000387663.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000556043.1 | PRMT5-018 | 603 | 104aa | ENSP00000452509.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V5T6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000553550.1 | PRMT5-014 | 580 | 183aa | ENSP00000450737.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V2L6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000554910.1 | PRMT5-015 | 577 | 169aa | ENSP00000452411.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V5L5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000556616.1 | PRMT5-027 | 571 | 185aa | ENSP00000450919.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V2X6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000421938.2 | PRMT5-026 | 565 | 186aa | ENSP00000409482.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JSX3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000554867.1 | PRMT5-028 | 555 | 180aa | ENSP00000452218.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V580 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000553502.1 | PRMT5-017 | 414 | 138aa | ENSP00000450956.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YJ77 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000557443.1 | PRMT5-006 | 337 | 61aa | ENSP00000452501.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000553915.1 | PRMT5-009 | 1931 | 69aa | ENSP00000451127.1 | Nonsense mediated decay | G3V3A3 | - | - | |
| ENST00000557415.1 | PRMT5-013 | 584 | 86aa | ENSP00000450633.1 | Nonsense mediated decay | G3V2F5 | - | - | |
| ENST00000553787.1 | PRMT5-025 | 579 | 42aa | ENSP00000452102.1 | Nonsense mediated decay | G3V507 | - | - | |
| ENST00000553641.1 | PRMT5-024 | 800 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000476175.2 | PRMT5-002 | 682 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000556426.1 | PRMT5-012 | 563 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000554716.1 | PRMT5-023 | 561 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000556032.1 | PRMT5-029 | 643 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000557015.1 | PRMT5-011 | 628 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000557758.1 | PRMT5-016 | 597 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000553417.1 | PRMT5-019 | 259 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
