Description
apolipoprotein L, 1 [Source:HGNC Symbol;Acc:618]
Gene Synonyms
APO-L, APOL, APOL-I, FSGS4
Location
Chromosome 22: 36,649,056-36,663,576 forward strand.
GRCh37:CM000684.1
About this gene
This gene has 14 transcripts (splice variants), 5 paralogues and is associated with 2 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000319136.4 | APOL1-003 | 3000 | 414aa | ENSP00000317674.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS13925 | B1AH96 G8JL88 O14791 | NM_145343.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000397278.3 | APOL1-001 | 2918 | 398aa | ENSP00000380448.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS13926 | B1AH96 G8JL88 O14791 | NM_003661.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000422706.1 | APOL1-203 | 2901 | 398aa | ENSP00000411507.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS13926 | B1AH96 G8JL88 O14791 | NM_001136540.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000426053.1 | APOL1-204 | 2808 | 380aa | ENSP00000388477.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46702 | G8JL88 O14791 | NM_001136541.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000397279.4 | APOL1-202 | 1564 | 398aa | ENSP00000380449.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS13926 | B1AH96 G8JL88 O14791 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000347595.7 | APOL1-201 | 1223 | 277aa | ENSP00000216178.8 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G8JL88 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000440669.2 | APOL1-205 | 1033 | 141aa | ENSP00000397625.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B1AH95 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000427990.1 | APOL1-011 | 624 | 159aa | ENSP00000391302.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B1AH96 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000438034.1 | APOL1-009 | 566 | 118aa | ENSP00000404525.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B1AH94 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000433768.1 | APOL1-013 | 541 | 141aa | ENSP00000392514.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B1AH95 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000422471.1 | APOL1-008 | 561 | 141aa | ENSP00000391206.1 | Nonsense mediated decay | B1AH95 | - | - | |
| ENST00000431184.1 | APOL1-014 | 550 | 142aa | ENSP00000392857.1 | Nonsense mediated decay | F8WCH3 | - | - | |
| ENST00000439680.1 | APOL1-012 | 531 | 123aa | ENSP00000397141.1 | Nonsense mediated decay | F8WB77 | - | - | |
| ENST00000475519.1 | APOL1-010 | 600 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
