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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SEC14L2 ENSG00000100003

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Description

SEC14-like 2 (S. cerevisiae) [Source:HGNC Symbol;Acc:10699]

Gene Synonyms

C22orf6, KIAA1186, KIAA1658, SPF, TAP, TAP1

Location

Chromosome 22: 30,792,846-30,821,305 forward strand.

GRCh37:CM000684.1

About this gene

This gene has 17 transcripts (splice variants) and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000312932.9	SEC14L2-001	4381	403aa	ENSP00000316203.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13876	B7Z3Z8 C9JZI9 O76054	NM_012429.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000403484.1	SEC14L2-003	2631	329aa	ENSP00000383993.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KRD8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000405717.3	SEC14L2-004	1733	392aa	ENSP00000385186.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46685	C9JZI9 O76054	NM_033382.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000402592.3	SEC14L2-201	1229	320aa	ENSP00000383882.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56228	O76054	NM_001204204.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000428195.1	SEC14L2-016	871	203aa	ENSP00000387781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JZI9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000429917.1	SEC14L2-021	565	84aa	ENSP00000407857.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JYY7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000415072.1	SEC14L2-022	485	125aa	ENSP00000399596.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JTM4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000452649.1	SEC14L2-017	674	53aa	ENSP00000388888.1	Nonsense mediated decay		F8WED8	-	-
ENST00000437022.1	SEC14L2-019	556	84aa	ENSP00000388719.1	Nonsense mediated decay		F8WEE7	-	-
ENST00000459728.1	SEC14L2-025	707	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000416523.1	SEC14L2-018	552	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485482.1	SEC14L2-005	244	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484486.1	SEC14L2-015	166	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467218.1	SEC14L2-002	2739	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000478762.1	SEC14L2-007	2184	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464335.1	SEC14L2-006	1149	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000483116.1	SEC14L2-023	573	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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