Description
nucleoporin 98kDa [Source:HGNC Symbol;Acc:8068]
Gene Synonyms
ADAR2, ADIR2, NUP196, NUP96
Location
Chromosome 11: 3,692,313-3,819,022 reverse strand.
GRCh37:CM000673.1
About this gene
This gene has 20 transcripts (splice variants) and is associated with 58 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000324932.7 | NUP98-001 | 6973 | 1800aa | ENSP00000316032.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS7746 | P52948 Q9HDC8 | NM_139132.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000359171.4 | NUP98-201 | 6770 | 1638aa | ENSP00000352091.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KP29 Q9HDC8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000355260.3 | NUP98-013 | 5628 | 1726aa | ENSP00000347404.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31347 | P52948 Q9HDC8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000397004.4 | NUP98-002 | 3923 | 920aa | ENSP00000380199.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41606 | P52948 Q9HDC8 | NM_139131.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000397007.4 | NUP98-004 | 3698 | 937aa | ENSP00000380202.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41605 | P52948 Q9HDC8 | NM_005387.5 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000429801.1 | NUP98-003 | 2541 | 753aa | ENSP00000413146.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000527104.1 | NUP98-019 | 705 | 235aa | ENSP00000436226.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9HDC8 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000533346.1 | NUP98-020 | 580 | 93aa | ENSP00000432275.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000532475.1 | NUP98-012 | 553 | 124aa | ENSP00000434698.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PNN0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000529379.1 | NUP98-017 | 536 | 179aa | ENSP00000432142.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000397013.2 | NUP98-018 | 939 | 136aa | ENSP00000380208.2 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000524563.1 | NUP98-014 | 841 | 232aa | ENSP00000433515.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000529063.1 | NUP98-015 | 544 | 75aa | ENSP00000433226.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000488828.1 | NUP98-008 | 712 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000469881.1 | NUP98-009 | 687 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000483285.1 | NUP98-007 | 545 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000461047.2 | NUP98-006 | 545 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000530345.1 | NUP98-011 | 436 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000530516.1 | NUP98-016 | 391 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000482690.1 | NUP98-010 | 310 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
