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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: GALNT11 ENSG00000178234

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Description

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11) [Source:HGNC Symbol;Acc:19875]

Gene Synonyms

FLJ21634, GALNACT11

Location

Chromosome 7: 151,722,759-151,819,425 forward strand.

GRCh37:CM000669.1

About this gene

This gene has 15 transcripts (splice variants), 202 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000434507.1	GALNT11-003	2747	608aa	ENSP00000416787.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5930	C9J111 C9J8A7 C9JMT8 Q8NCW6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000430044.2	GALNT11-008	2720	608aa	ENSP00000395122.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5930	C9J111 C9J8A7 C9JMT8 Q8NCW6	NM_022087.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000415421.1	GALNT11-002	2555	202aa	ENSP00000410093.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J111 C9J8A7 C9JMT8 Q8NCW6	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000320311.2	GALNT11-201	2482	608aa	ENSP00000315835.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5930	C9J111 C9J8A7 C9JMT8 Q8NCW6	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000452146.2	GALNT11-203	1736	527aa	ENSP00000393399.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z5G5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000422997.2	GALNT11-202	948	133aa	ENSP00000389449.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z3L9 C9JMT8 C9JPR8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000447796.1	GALNT11-011	717	160aa	ENSP00000412142.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J111 C9JMT8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000419245.1	GALNT11-010	716	186aa	ENSP00000397581.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J111 C9J8A7 C9JMT8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000431668.1	GALNT11-009	626	98aa	ENSP00000395020.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JMT8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000423337.1	GALNT11-013	580	151aa	ENSP00000393892.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JMT8 C9K0N9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000446096.1	GALNT11-012	521	113aa	ENSP00000414890.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JMT8 C9JPR8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000447778.1	GALNT11-004	1231	133aa	ENSP00000395078.1	Nonsense mediated decay		B7Z3L9 C9JMT8 C9JPR8	-	-
ENST00000431940.1	GALNT11-014	600	65aa	ENSP00000390247.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000482812.1	GALNT11-007	580	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491061.1	GALNT11-006	3863	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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