Description
period circadian clock 1 [Source:HGNC Symbol;Acc:8845]
Gene Synonyms
KIAA0482, PER, RIGUI, hPER, hsa-mir-6883
Location
Chromosome 17: 8,043,790-8,059,824 reverse strand.
GRCh37:CM000679.1
About this gene
This gene has 19 transcripts (splice variants), 2 paralogues and is associated with 55 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000317276.4 | PER1-001 | 4707 | 1290aa | ENSP00000314420.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11131 | A2I2P6 J3QLQ5 O15534 | NM_002616.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000581082.1 | PER1-005 | 4521 | 1267aa | ENSP00000462064.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KRL7 J3QLQ5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000354903.5 | PER1-002 | 3115 | 859aa | ENSP00000346979.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DI49 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000577253.1 | PER1-008 | 589 | 117aa | ENSP00000462546.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KSL6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000584202.1 | PER1-010 | 576 | 112aa | ENSP00000463661.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QLQ5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000581703.1 | PER1-009 | 528 | 175aa | ENSP00000463385.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QL55 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000583559.1 | PER1-016 | 523 | 168aa | ENSP00000463369.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QL46 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000582719.1 | PER1-006 | 3677 | 824aa | ENSP00000463054.1 | Nonsense mediated decay | J3KTM2 J3QLQ5 | - | - | |
| ENST00000581395.1 | PER1-003 | 3209 | 572aa | ENSP00000464696.1 | Nonsense mediated decay | J3QLQ5 J3QSH9 | - | - | |
| ENST00000578089.1 | PER1-015 | 830 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000579065.1 | PER1-004 | 1262 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000578223.1 | PER1-011 | 717 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000585095.1 | PER1-014 | 691 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000577424.1 | PER1-013 | 626 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000579203.1 | PER1-012 | 564 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000578950.1 | PER1-018 | 540 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000583677.1 | PER1-007 | 512 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000585284.1 | PER1-019 | 461 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000579098.1 | PER1-017 | 367 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
