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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PFAS ENSG00000178921

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Description

phosphoribosylformylglycinamidine synthase [Source:HGNC Symbol;Acc:8863]

Gene Synonyms

FGAMS, FGARAT, KIAA0361, PURL

Location

Chromosome 17: 8,150,936-8,173,809 forward strand.

GRCh37:CM000679.1

About this gene

This gene has 12 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000314666.6	PFAS-001	5371	1338aa	ENSP00000313490.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11136	F5GWT9 J3KTL4 J3QL39 J3QSH6 O15067 Q6P4B4 Q9BR56	NM_012393.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545834.1	PFAS-201	4242	914aa	ENSP00000441706.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GWT9 Q6P4B4 Q9BR56	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546020.2	PFAS-004	2652	385aa	ENSP00000443244.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000585183.1	PFAS-005	581	87aa	ENSP00000463362.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QL39	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000584044.1	PFAS-007	557	135aa	ENSP00000464689.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KTL4 J3QL39 J3QSH6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000581242.1	PFAS-008	553	103aa	ENSP00000463045.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KTL4 J3QL39	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000583059.1	PFAS-003	349	116aa	ENSP00000462874.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000580356.1	PFAS-002	4242	131aa	ENSP00000464671.1	Nonsense mediated decay		J3KTL4 J3QL39 J3QSG0	-	-
ENST00000578979.1	PFAS-011	765	62aa	ENSP00000463103.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000585319.1	PFAS-009	598	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000580251.1	PFAS-012	559	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000581288.1	PFAS-010	527	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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