Description
heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) [Source:HGNC Symbol;Acc:5036]
Gene Synonyms
AUF1, AUF1A, HNRPD, P37, hnRNPD0
Location
Chromosome 4: 83,273,651-83,295,656 reverse strand.
GRCh37:CM000666.1
About this gene
This gene has 14 transcripts (splice variants), 7 paralogues and is associated with 2 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000313899.7 | HNRNPD-001 | 3033 | 355aa | ENSP00000313199.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3592 | D6RAF8 D6RF44 F5H6R6 Q14103 | NM_031370.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000352301.4 | HNRNPD-003 | 1667 | 336aa | ENSP00000305860.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3591 | D6RBQ9 D6RF44 F5H6R6 Q14103 | NM_031369.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000353341.4 | HNRNPD-002 | 1585 | 306aa | ENSP00000313327.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3590 | D6RAF8 D6RF44 Q14103 | NM_002138.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000541060.1 | HNRNPD-201 | 1411 | 201aa | ENSP00000437416.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H6R6 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000543098.1 | HNRNPD-202 | 1263 | 303aa | ENSP00000439380.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DTC3 D6RF44 F5H6R6 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000514671.1 | HNRNPD-005 | 1089 | 210aa | ENSP00000426446.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RF44 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000509263.1 | HNRNPD-011 | 782 | 260aa | ENSP00000420926.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RF44 H0Y8G5 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000507010.1 | HNRNPD-008 | 748 | 221aa | ENSP00000421952.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAF8 D6RF44 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000503822.1 | HNRNPD-007 | 607 | 155aa | ENSP00000422615.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RBQ9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000509107.1 | HNRNPD-009 | 583 | 92aa | ENSP00000425439.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RD83 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000515432.1 | HNRNPD-010 | 545 | 111aa | ENSP00000426666.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RF44 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000513584.1 | HNRNPD-004 | 1240 | 86aa | ENSP00000424002.1 | Nonsense mediated decay | D6RBP9 | - | - | |
| ENST00000508119.1 | HNRNPD-012 | 735 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000514325.1 | HNRNPD-006 | 4597 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
