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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: NPAS4 ENSG00000174576

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Description

neuronal PAS domain protein 4 [Source:HGNC Symbol;Acc:18983]

Gene Synonyms

BHLHE79, Le-PAS, NXF, PASD10, bHLHe79

Location

Chromosome 11: 66,188,475-66,194,178 forward strand.

GRCh37:CM000673.1

About this gene

This gene has 3 transcripts (splice variants), 215 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000311034.2	NPAS4-001	3303	802aa	ENSP00000311196.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8138	Q8IUM7	NM_178864.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000525148.1	NPAS4-002	2454	234aa	ENSP00000433135.1	Nonsense mediated decay		B7ZL81	-	-
ENST00000524617.1	NPAS4-004	326	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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