Gene: SP3 ENSG00000172845

Description

Sp3 transcription factor [Source:HGNC Symbol;Acc:11208]

Gene Synonyms

SPR-2, SPR2

Location

Chromosome 2: 174,771,187-174,830,430 reverse strand.

GRCh37:CM000664.1

About this gene

This gene has 8 transcripts (splice variants) and 25 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000310015.6	SP3-001	6359	781aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2254	H0Y6K5 Q02447 Q68DP2	NM_003111.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000455789.2	SP3-201	6236	728aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q02447 Q68DP2 Q8TE45	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000418194.2	SP3-003	3937	713aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46452	H0Y6K5 Q68DP2	NM_001017371.4	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000416195.1	SP3-002	3627	738aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q68DP2 Q8TE45	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000483084.1	SP3-005	567	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462904.1	SP3-007	535	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490182.1	SP3-008	459	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465379.1	SP3-004	5489	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Name

SP3 (HGNC Symbol)

UniProtKB

This gene has proteins that correspond to the following UniProtKB identifiers: Q02447

CCDS

This gene is a member of the Human CCDS set: CCDS2254.1, CCDS46452.1

Ensembl version

ENSG00000172845.9

Other assemblies

This gene maps to 173,906,459-173,965,702 in GRCh38 coordinates.

Gene type

Protein coding

Annotation method

Annotation for this gene includes both automatic annotation from Ensembl and Havana manual curation, see article.

Alternative genes

This gene corresponds to the following database identifiers:

Havana gene:	OTTHUMG00000132333 (version 3)

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Gene: SP3 ENSG00000172845

Summary