Description
solute carrier family 5 (sodium/multivitamin and iodide cotransporter), member 6 [Source:HGNC Symbol;Acc:11041]
Gene Synonyms
SMVT
Location
Chromosome 2: 27,422,455-27,435,826 reverse strand.
GRCh37:CM000664.1
About this gene
This gene has 18 transcripts (splice variants), 11 paralogues and is associated with 2 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000310574.3 | SLC5A6-001 | 3231 | 635aa | ENSP00000310208.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS1740 | E7EMX0 E7ENG0 E7ENN0 E7EP02 E7ERE1 E7EW41 E7EW78 E7EXC0 Q9HD19 Q9Y289 | NM_021095.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000408041.1 | SLC5A6-003 | 2230 | 635aa | ENSP00000384853.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS1740 | E7EMX0 E7ENG0 E7ENN0 E7EP02 E7ERE1 E7EW41 E7EW78 E7EXC0 Q9HD19 Q9Y289 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000412471.1 | SLC5A6-004 | 917 | 193aa | ENSP00000403851.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EMX0 E7ENG0 E7ENN0 E7EP02 E7ERE1 E7EW41 E7EW78 E7EXC0 Q9HD19 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000414408.1 | SLC5A6-005 | 741 | 78aa | ENSP00000404032.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EP02 E7EW41 E7EXC0 Q9HD19 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000401463.1 | SLC5A6-006 | 732 | 147aa | ENSP00000384265.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7ENG0 E7EP02 E7ERE1 E7EW41 E7EW78 E7EXC0 Q9HD19 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000432106.1 | SLC5A6-009 | 725 | 133aa | ENSP00000411536.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7ENG0 E7EP02 E7ERE1 E7EW41 E7EXC0 Q9HD19 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000426119.1 | SLC5A6-007 | 676 | 115aa | ENSP00000401347.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EP02 E7ERE1 E7EW41 E7EXC0 Q9HD19 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000430186.1 | SLC5A6-011 | 599 | 38aa | ENSP00000399299.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EXC0 Q9HD19 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000428518.1 | SLC5A6-012 | 570 | 58aa | ENSP00000402903.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EP02 E7EXC0 Q9HD19 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000442731.1 | SLC5A6-010 | 542 | 27aa | ENSP00000412115.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9HD19 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000445802.1 | SLC5A6-008 | 871 | 153aa | ENSP00000411361.1 | Nonsense mediated decay | E7ENG0 E7ENN0 E7EP02 E7ERE1 E7EW41 E7EW78 E7EXC0 Q9HD19 | - | - | |
| ENST00000461319.1 | SLC5A6-017 | 598 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000488743.2 | SLC5A6-002 | 3174 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000461757.1 | SLC5A6-018 | 2307 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000476319.1 | SLC5A6-014 | 842 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000492069.1 | SLC5A6-015 | 705 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000464538.1 | SLC5A6-013 | 664 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000481751.1 | SLC5A6-016 | 615 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
