Description
oxidized low density lipoprotein (lectin-like) receptor 1 [Source:HGNC Symbol;Acc:8133]
Gene Synonyms
CLEC8A, LOX-1, LOX1, LOXIN, SCARE1, SLOX1
Location
Chromosome 12: 10,310,902-10,324,737 reverse strand.
GRCh37:CM000674.1
About this gene
This gene has 11 transcripts (splice variants) and 6 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000309539.3 | OLR1-001 | 2460 | 273aa | ENSP00000309124.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8618 | F5H001 F5H0N6 F5H3G7 F5H7N8 J3QTI8 P78380 | NM_002543.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000545927.1 | OLR1-008 | 1008 | 189aa | ENSP00000439251.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53746 | F5H001 F5H0N6 P78380 | NM_001172633.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000432556.2 | OLR1-002 | 950 | 181aa | ENSP00000405116.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53745 | B7ZAN8 P78380 | NM_001172632.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000544577.1 | OLR1-003 | 924 | 165aa | ENSP00000444457.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GZH1 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000543993.1 | OLR1-005 | 822 | 77aa | ENSP00000445085.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7ZAN8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000539518.1 | OLR1-007 | 732 | 214aa | ENSP00000442389.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H001 F5H0N6 F5H3G7 F5H7N8 J3QTI8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000339968.6 | OLR1-010 | 591 | 104aa | ENSP00000340572.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H0N6 J3QTI8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000538745.1 | OLR1-009 | 583 | 123aa | ENSP00000438925.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H0N6 F5H3G7 J3QTI8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000538873.1 | OLR1-013 | 516 | 57aa | ENSP00000438744.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H0N6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000543414.1 | OLR1-006 | 466 | 104aa | ENSP00000444068.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H001 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000536989.1 | OLR1-014 | 569 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
