Description
protein tyrosine phosphatase, non-receptor type 7 [Source:HGNC Symbol;Acc:9659]
Gene Synonyms
BPTP-4, HEPTP, LC-PTP, LPTP, PTPNI
Location
Chromosome 1: 202,116,141-202,130,716 reverse strand.
GRCh37:CM000663.1
About this gene
This gene has 21 transcripts (splice variants) and 7 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000309017.3 | PTPN7-001 | 3765 | 465aa | ENSP00000309116.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS1423 | B4DDG6 B4DX06 C9JBA9 E7EUM0 E9PE54 | NM_002832.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000367279.4 | PTPN7-003 | 3265 | 399aa | ENSP00000356248.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS1422 | B4DDG6 B4DX06 C9JBA9 E7EUM0 E9PE54 P35236 | NM_080588.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000308986.5 | PTPN7-201 | 2805 | 360aa | ENSP00000311133.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DDG6 B4DX06 C9JBA9 E7EUM0 E9PE54 P35236 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000477554.1 | PTPN7-005 | 1432 | 441aa | ENSP00000418416.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DDG6 B4DX06 B4DZD9 C9JBA9 E7EUM0 E9PE54 J3KR55 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000543735.1 | PTPN7-202 | 1189 | 189aa | ENSP00000444624.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DDG6 B4DX06 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000544762.1 | PTPN7-203 | 1147 | 136aa | ENSP00000438272.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DX06 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000477625.1 | PTPN7-013 | 673 | 225aa | ENSP00000418129.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000467283.1 | PTPN7-017 | 577 | 153aa | ENSP00000418837.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9IYI6 C9JBA9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000435759.2 | PTPN7-015 | 575 | 153aa | ENSP00000406042.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JAW7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000492451.1 | PTPN7-012 | 560 | 102aa | ENSP00000417410.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JBA9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000486116.1 | PTPN7-016 | 551 | 140aa | ENSP00000417350.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JBA9 E9PE54 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000476061.1 | PTPN7-020 | 550 | 183aa | ENSP00000419993.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7C5I3 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000464870.1 | PTPN7-018 | 542 | 154aa | ENSP00000420434.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JBA9 E7EUM0 E9PE54 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000495688.1 | PTPN7-011 | 2689 | 360aa | ENSP00000420506.1 | Nonsense mediated decay | B4DDG6 B4DX06 C9JBA9 E7EUM0 E9PE54 P35236 | - | - | |
| ENST00000496197.1 | PTPN7-009 | 1463 | 140aa | ENSP00000419523.1 | Nonsense mediated decay | F8WF08 | - | - | |
| ENST00000480836.1 | PTPN7-007 | 1189 | 76aa | ENSP00000419733.1 | Nonsense mediated decay | F8WEY3 | - | - | |
| ENST00000462815.1 | PTPN7-010 | 1147 | 116aa | ENSP00000419196.1 | Nonsense mediated decay | C9JBA9 F8WF66 | - | - | |
| ENST00000492977.1 | PTPN7-004 | 1595 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000479092.1 | PTPN7-014 | 545 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000468385.1 | PTPN7-008 | 1061 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000491584.1 | PTPN7-019 | 573 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
