Description
syndecan 2 [Source:HGNC Symbol;Acc:10659]
Gene Synonyms
CD362, HSPG, HSPG1, SYND2, fibroglycan
Location
Chromosome 8: 97,505,579-97,624,000 forward strand.
GRCh37:CM000670.1
About this gene
This gene has 8 transcripts (splice variants) and 3 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000302190.4 | SDC2-001 | 3751 | 201aa | ENSP00000307046.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6272 | B4DT61 E5RHU3 E5RJB8 E9PBI9 P34741 | NM_002998.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000518385.1 | SDC2-002 | 1583 | 165aa | ENSP00000429045.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DT61 E7ESK6 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000519914.1 | SDC2-003 | 1318 | 172aa | ENSP00000428256.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DT61 E5RHU3 E5RJB8 E9PBI9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000522911.1 | SDC2-006 | 677 | 172aa | ENSP00000427784.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DT61 E5RHU3 E5RJB8 E9PBI9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000523877.1 | SDC2-005 | 621 | 145aa | ENSP00000429662.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RHU3 E5RJB8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000521590.1 | SDC2-004 | 507 | 137aa | ENSP00000429121.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RJB8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000520233.1 | SDC2-008 | 563 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000519587.1 | SDC2-007 | 557 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |
