Description
suppressor of variegation 4-20 homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:24283]
Gene Synonyms
CGI-85, CGI85, KMT5B
Location
Chromosome 11: 67,922,330-67,981,295 reverse strand.
GRCh37:CM000673.1
About this gene
This gene has 14 transcripts (splice variants), 1 paralogue and is associated with 2 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000304363.4 | SUV420H1-001 | 5837 | 885aa | ENSP00000305899.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31623 | C9J6S5 C9JFG1 C9JP58 E9PKD9 Q4FZB7 | NM_017635.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000405515.1 | SUV420H1-003 | 2869 | 393aa | ENSP00000385640.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44660 | C9J6S5 C9JFG1 C9JP58 E9PKD9 Q4FZB7 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000401547.2 | SUV420H1-010 | 2666 | 393aa | ENSP00000385965.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44660 | C9J6S5 C9JFG1 C9JP58 E9PKD9 Q4FZB7 | NM_016028.4 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000402185.2 | SUV420H1-005 | 1881 | 370aa | ENSP00000384724.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7WNX0 E9PKD9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000402789.1 | SUV420H1-009 | 1599 | 402aa | ENSP00000385005.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B5MCB3 C9J6S5 C9JFG1 C9JP58 E9PKD9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000453170.1 | SUV420H1-006 | 594 | 120aa | ENSP00000406377.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J6S5 C9JFG1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000434573.1 | SUV420H1-008 | 585 | 118aa | ENSP00000402921.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JP58 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000458496.1 | SUV420H1-004 | 556 | 100aa | ENSP00000403233.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JFG1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000533271.1 | SUV420H1-014 | 521 | 64aa | ENSP00000433589.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PKD9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000441488.2 | SUV420H1-011 | 2816 | 278aa | ENSP00000411146.2 | Nonsense mediated decay | C9J6S5 C9JFG1 C9JP58 E9PKD9 Q4FZB7 | - | - | |
| ENST00000427752.2 | SUV420H1-002 | 2475 | 159aa | ENSP00000387685.2 | Nonsense mediated decay | C9JP58 F8WFA4 | - | - | |
| ENST00000323599.6 | SUV420H1-012 | 653 | 103aa | ENSP00000313027.6 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000524672.1 | SUV420H1-013 | 662 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000466295.1 | SUV420H1-007 | 638 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
