Gene: ABR ENSG00000159842

Description

active BCR-related [Source:HGNC Symbol;Acc:81]

Gene Synonyms

MDB

Location

Chromosome 17: 906,758-1,132,315 reverse strand.

GRCh37:CM000679.1

About this gene

This gene has 36 transcripts (splice variants) and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000302538.5	ABR-001	5289	859aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10999	B7Z2X0 I3L259 I3L2L3 I3L2P5 I3L4Y1 Q12979	NM_021962.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000544583.2	ABR-004	5595	813aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54060	B7Z2X0 I3L259 I3L2L3 I3L2P5 I3L4Y1 Q12979	NM_001159746.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000574437.1	ABR-002	3196	813aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54060	B7Z2X0 I3L259 I3L2L3 I3L2P5 I3L4Y1 Q12979	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000291107.2	ABR-003	2673	822aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11000	B7Z2X0 I3L2P5 Q12979	NM_001092.4	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000536794.2	ABR-026	2213	641aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z683	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000543210.2	ABR-005	1049	310aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58497	Q12979	NM_001256847.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000571797.1	ABR-013	850	191aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000571945.1	ABR-025	760	165aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L1U8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000570441.1	ABR-030	690	168aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L2P5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000575934.1	ABR-029	689	133aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L3W0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000573559.1	ABR-012	685	177aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L434	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000574139.1	ABR-034	678	129aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L259 I3L2L3 I3L4Y1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000574266.1	ABR-032	597	86aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L259	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000574544.1	ABR-024	566	189aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000572441.1	ABR-014	563	153aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L2C0	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000570525.1	ABR-031	549	88aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L259 I3L2L3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000572152.1	ABR-008	637	117aa	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000573895.1	ABR-022	1010	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000577052.1	ABR-015	617	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000575770.1	ABR-023	614	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000576964.1	ABR-020	574	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000574048.2	ABR-036	563	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000571383.1	ABR-017	557	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000571120.1	ABR-018	551	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000571022.1	ABR-019	551	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000574632.1	ABR-035	538	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000571306.1	ABR-037	501	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000571543.1	ABR-033	384	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000572585.1	ABR-006	3776	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000570688.1	ABR-011	579	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000573667.1	ABR-027	560	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000572650.1	ABR-010	553	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000576668.1	ABR-016	553	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000574257.1	ABR-009	532	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000573325.1	ABR-028	471	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000574875.1	ABR-021	239	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Name

ABR (HGNC Symbol)

UniProtKB

This gene has proteins that correspond to the following UniProtKB identifiers: Q12979

CCDS

This gene is a member of the Human CCDS set: CCDS10999.1, CCDS11000.1, CCDS54060.1, CCDS58497.1

Ensembl version

ENSG00000159842.10

Other assemblies

There is no ungapped mapping of this gene onto the GRCh38 assembly.

Gene type

Protein coding

Annotation method

Annotation for this gene includes both automatic annotation from Ensembl and Havana manual curation, see article.

Alternative genes

This gene corresponds to the following database identifiers:

Havana gene:	OTTHUMG00000090313 (version 14)

Loading component

Favourite species

All species

Recent locations

Gene: ABR ENSG00000159842

Summary