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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: TRAPPC1 ENSG00000170043

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Description

trafficking protein particle complex 1 [Source:HGNC Symbol;Acc:19894]

Gene Synonyms

BET5, MUM2

Location

Chromosome 17: 7,833,663-7,835,441 reverse strand.

GRCh37:CM000679.1

About this gene

This gene has 7 transcripts (splice variants), 182 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000303731.4	TRAPPC1-001	811	145aa	ENSP00000302783.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11125	I3L3S0 I3L3V5 Q9Y5R8	NM_021210.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000540486.1	TRAPPC1-201	759	145aa	ENSP00000441130.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11125	I3L3S0 I3L3V5 Q9Y5R8	NM_001166621.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000572656.1	TRAPPC1-002	409	75aa	ENSP00000460761.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L3V5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000571947.1	TRAPPC1-006	306	95aa	ENSP00000460674.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L3S0 I3L3V5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000571739.1	TRAPPC1-003	648	42aa	ENSP00000459045.1	Nonsense mediated decay		I3L1R8	-	-
ENST00000575639.1	TRAPPC1-004	561	42aa	ENSP00000460702.1	Nonsense mediated decay		I3L1R8	-	-
ENST00000573989.1	TRAPPC1-005	436	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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