Description
damage-specific DNA binding protein 1, 127kDa [Source:HGNC Symbol;Acc:2717]
Gene Synonyms
DDBA, UV-DDB1, XAP1, XPCE, XPE, XPE-BF
Location
Chromosome 11: 61,066,923-61,110,068 reverse strand.
GRCh37:CM000673.1
About this gene
This gene has 26 transcripts (splice variants), 1 paralogue and is associated with 1 phenotype.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000301764.7 | DDB1-001 | 4506 | 1140aa | ENSP00000301764.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31576 | F5GYG8 F5GZ34 F5GZY8 F5H0Y5 F5H2L3 F5H581 F5H6C5 F5H775 F8WF81 Q16531 | NM_001923.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000535147.1 | DDB1-021 | 2789 | 267aa | ENSP00000444650.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H581 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000450997.2 | DDB1-201 | 1801 | 451aa | ENSP00000388705.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DG00 F5GZ34 F5H0Y5 F5H198 F8WF81 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000539332.1 | DDB1-024 | 1767 | 203aa | ENSP00000439787.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H0Y5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000539739.1 | DDB1-017 | 1624 | 303aa | ENSP00000445563.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H238 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000535967.1 | DDB1-018 | 1404 | 272aa | ENSP00000437713.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H6C5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000537877.1 | DDB1-019 | 1375 | 240aa | ENSP00000442732.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H775 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000451943.2 | DDB1-026 | 1224 | 127aa | ENSP00000399813.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8WF81 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000535283.1 | DDB1-007 | 1220 | 139aa | ENSP00000441825.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GWI0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000541513.1 | DDB1-015 | 958 | 182aa | ENSP00000442660.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H7A0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000535174.1 | DDB1-013 | 896 | 254aa | ENSP00000446044.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H4N9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000538470.1 | DDB1-025 | 858 | 187aa | ENSP00000441522.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GZ34 F8WF81 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000539426.1 | DDB1-009 | 805 | 165aa | ENSP00000445554.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H2L3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000543658.1 | DDB1-012 | 571 | 162aa | ENSP00000445844.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H198 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000542337.1 | DDB1-008 | 558 | 146aa | ENSP00000444105.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GYG8 F5GZY8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000543627.1 | DDB1-006 | 540 | 109aa | ENSP00000440660.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GYG8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000540166.1 | DDB1-002 | 3906 | 1092aa | ENSP00000440269.1 | Nonsense mediated decay | F5GY55 F5GYG8 F5GZY8 F5H0Y5 F5H2L3 F5H581 F5H6C5 F5H775 | - | - | |
| ENST00000545930.1 | DDB1-005 | 1278 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000543162.1 | DDB1-011 | 575 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000538280.1 | DDB1-027 | 227 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000545894.1 | DDB1-023 | 2282 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000414411.2 | DDB1-022 | 1904 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000537120.1 | DDB1-014 | 1215 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000540784.1 | DDB1-016 | 1119 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000539712.1 | DDB1-020 | 1020 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000538129.1 | DDB1-010 | 475 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
