Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VCAM1 ENSG00000162692

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Description

vascular cell adhesion molecule 1 [Source:HGNC Symbol;Acc:12663]

Gene Synonyms

CD106, INCAM-100, L1CAM

Location

Chromosome 1: 101,185,298-101,204,601 forward strand.

GRCh37:CM000663.1

About this gene

This gene has 5 transcripts (splice variants) and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000294728.2	VCAM1-001	3083	739aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS773	F2YYR6 F8UU18 F8UV74 G0ZFQ0 G0ZI12 P19320 Q68DC4	NM_001078.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000347652.2	VCAM1-002	2812	647aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS774	F8UU18 F8UV74 G0ZFQ0 G0ZI12 P19320 Q68DC4	NM_080682.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000370119.4	VCAM1-004	2483	677aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55617	F2YYR6 F8UU18 F8UV74 G0ZFQ0 P19320 Q68DC4	NM_001199834.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000370115.1	VCAM1-003	2475	540aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PDD2 F8UV74 G0ZFQ0 G0ZI12 Q68DC4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000603679.1	VCAM1-005	3865	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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