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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RAVER1 ENSG00000161847

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Description

ribonucleoprotein, PTB-binding 1 [Source:HGNC Symbol;Acc:30296]

Gene Synonyms

KIAA1978

Location

Chromosome 19: 10,426,888-10,444,316 reverse strand.

GRCh37:CM000681.1

About this gene

This gene has 5 transcripts (splice variants) and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000293677.6	RAVER1-001	3595	756aa	ENSP00000293677.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45960	E9PAU2 K7EQG2	NM_133452.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000585935.1	RAVER1-006	470	156aa	ENSP00000465532.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EKA4	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000591969.1	RAVER1-004	742	96aa	ENSP00000465753.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000593136.1	RAVER1-005	500	130aa	ENSP00000468375.1	Nonsense mediated decay		K7ERR4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000592208.1	RAVER1-003	4693	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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