Description
phosphate cytidylyltransferase 1, choline, alpha [Source:HGNC Symbol;Acc:8754]
Gene Synonyms
CCTA, CT, CTA, CTPCT, PCYT1
Location
Chromosome 3: 195,941,093-196,014,828 reverse strand.
GRCh37:CM000665.1
About this gene
This gene has 16 transcripts (splice variants), 1 paralogue and is associated with 4 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000292823.2 | PCYT1A-001 | 5597 | 367aa | ENSP00000292823.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3315 | C9J050 C9JPY0 C9JVS0 P49585 | NM_005017.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000431016.1 | PCYT1A-005 | 1482 | 367aa | ENSP00000394617.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3315 | C9J050 C9JPY0 C9JVS0 P49585 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000419333.1 | PCYT1A-006 | 1325 | 380aa | ENSP00000390968.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J050 C9JEJ2 C9JPY0 C9JVS0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000411591.1 | PCYT1A-009 | 1084 | 293aa | ENSP00000400430.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J050 C9JPY0 C9JVS0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000430755.1 | PCYT1A-018 | 798 | 201aa | ENSP00000402283.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7C1T3 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000441879.1 | PCYT1A-011 | 724 | 212aa | ENSP00000392397.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J2E1 C9JPY0 C9JVS0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000443555.1 | PCYT1A-007 | 549 | 115aa | ENSP00000393341.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JVS0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000412869.1 | PCYT1A-014 | 499 | 133aa | ENSP00000402015.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JPY0 C9JVS0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000433733.1 | PCYT1A-016 | 411 | 137aa | ENSP00000390458.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7BZN1 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000444822.1 | PCYT1A-010 | 724 | 134aa | ENSP00000397888.1 | Nonsense mediated decay | F8WAZ5 | - | - | |
| ENST00000438634.1 | PCYT1A-012 | 555 | 90aa | ENSP00000391405.1 | Nonsense mediated decay | F8WBU2 | - | - | |
| ENST00000491544.1 | PCYT1A-013 | 589 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000473978.1 | PCYT1A-004 | 1430 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000460677.1 | PCYT1A-002 | 1393 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000460827.1 | PCYT1A-017 | 562 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000488235.1 | PCYT1A-015 | 466 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
