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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: AMFR ENSG00000159461

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Description

autocrine motility factor receptor, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:463]

Gene Synonyms

GP78, RNF45, gp78

Location

Chromosome 16: 56,395,364-56,459,450 reverse strand.

GRCh37:CM000678.1

About this gene

This gene has 12 transcripts (splice variants) and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000290649.5	AMFR-001	3600	643aa	ENSP00000290649.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10758	H3BQM3 H3BSK3 Q1RN03 Q6PGR1 Q9UKV5	NM_001144.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000492830.1	AMFR-002	2249	299aa	ENSP00000473636.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6PGR1 R4GNG2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000567738.1	AMFR-009	866	288aa	ENSP00000456288.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BRK9	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000565445.1	AMFR-005	803	229aa	ENSP00000456745.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BQM3 H3BSK3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000563664.1	AMFR-007	567	165aa	ENSP00000455842.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BQM3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000564283.1	AMFR-008	550	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000568657.1	AMFR-006	539	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000566757.1	AMFR-004	1844	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000568325.1	AMFR-003	1230	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000563285.1	AMFR-012	486	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000566334.1	AMFR-011	426	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000568762.1	AMFR-010	424	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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