Description
neuroplastin [Source:HGNC Symbol;Acc:17867]
Gene Synonyms
GP55, GP65, SDFR1, SDR1, np55, np65
Location
Chromosome 15: 73,852,355-73,926,475 reverse strand.
GRCh37:CM000677.1
About this gene
This gene has 13 transcripts (splice variants) and 2 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000345330.4 | NPTN-001 | 2444 | 398aa | ENSP00000290401.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10249 | H3BQ94 Q9UFM8 Q9Y639 | NM_012428.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000351217.6 | NPTN-002 | 2817 | 282aa | ENSP00000342958.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10250 | Q9Y639 | NM_017455.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000545878.1 | NPTN-203 | 1373 | 394aa | ENSP00000444548.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GZD0 H3BQ94 Q9UFM8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000565282.1 | NPTN-004 | 1247 | 308aa | ENSP00000456033.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BQ94 Q9UFM8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000563691.1 | NPTN-005 | 1214 | 394aa | ENSP00000457028.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58380 | H3BQ94 Q9UFM8 Q9Y639 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000287226.8 | NPTN-201 | 1205 | 338aa | ENSP00000287226.8 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BQ94 H7BXJ1 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000562924.1 | NPTN-008 | 1094 | 278aa | ENSP00000456349.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58379 | Q9Y639 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000565325.1 | NPTN-003 | 858 | 184aa | ENSP00000457470.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BU51 | - | - | |
| ENST00000542234.1 | NPTN-202 | 858 | 193aa | ENSP00000440593.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GYM7 H3BU51 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000567198.1 | NPTN-011 | 571 | 152aa | ENSP00000455671.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BQ94 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000564551.1 | NPTN-009 | 586 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000563753.1 | NPTN-006 | 599 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000561898.1 | NPTN-007 | 447 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
