Gene: SLC6A1 ENSG00000157103

Description

solute carrier family 6 (neurotransmitter transporter), member 1 [Source:HGNC Symbol;Acc:11042]

Gene Synonyms

GABATHG, GABATR, GABT1, GAT1

Location

Chromosome 3: 11,034,410-11,080,933 forward strand.

GRCh37:CM000665.1

About this gene

This gene has 6 transcripts (splice variants), 12 paralogues and is associated with 4 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000287766.4	SLC6A1-001	4502	599aa	ENSP00000287766.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2603	B7Z3C5 C9J5P8 P30531	NM_003042.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000536032.1	SLC6A1-201	1756	421aa	ENSP00000445171.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z3C5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000425938.1	SLC6A1-002	472	38aa	ENSP00000411689.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J5P8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000462473.1	SLC6A1-003	493	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460480.1	SLC6A1-004	457	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495636.1	SLC6A1-005	1088	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Gene: SLC6A1 ENSG00000157103

Summary