Gene: CSF1R ENSG00000182578

Description

colony stimulating factor 1 receptor [Source:HGNC Symbol;Acc:2433]

Gene Synonyms

C-FMS, CD115, CSF-1R, CSFR, FIM2, FMS, HDLS, M-CSF-R

Location

Chromosome 5: 149,432,854-149,492,935 reverse strand.

GRCh37:CM000667.1

About this gene

This gene has 9 transcripts (splice variants), 12 paralogues and is associated with 78 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000286301.3	CSF1R-001	3989	972aa	ENSP00000286301.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4302	D6RGW1 P07333 Q6LEI2	NM_005211.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000543093.1	CSF1R-201	921	306aa	ENSP00000445282.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RGW1 P07333	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000511344.1	CSF1R-004	655	49aa	ENSP00000421174.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RGW1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000504875.1	CSF1R-002	3697	671aa	ENSP00000422212.1	Nonsense mediated decay		D6RGW1 E9PEK4 Q59HE0 Q6LEI2	-	-
ENST00000515068.1	CSF1R-007	723	64aa	ENSP00000427545.1	Nonsense mediated decay		H0YAL5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000515239.1	CSF1R-005	584	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000502660.1	CSF1R-003	1388	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000509861.1	CSF1R-008	886	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000513609.1	CSF1R-006	711	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Gene: CSF1R ENSG00000182578

Summary