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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LPCAT1 ENSG00000153395

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Description

lysophosphatidylcholine acyltransferase 1 [Source:HGNC Symbol;Acc:25718]

Gene Synonyms

AYTL2, FLJ12443, PFAAP3, lpcat

Location

Chromosome 5: 1,456,595-1,524,092 reverse strand.

GRCh37:CM000667.1

About this gene

This gene has 6 transcripts (splice variants) and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000283415.3	LPCAT1-002	3966	534aa	ENSP00000283415.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3864	D3DTC2 Q8NF37	NM_024830.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000475622.1	LPCAT1-001	5610	534aa	ENSP00000423472.1	Nonsense mediated decay	CCDS3864	D3DTC2 Q8NF37	-	-
ENST00000503252.1	LPCAT1-003	2694	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000514484.2	LPCAT1-004	756	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513757.1	LPCAT1-008	547	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000507282.1	LPCAT1-006	417	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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