Gene: CAPN1 ENSG00000014216

Description

calpain 1, (mu/I) large subunit [Source:HGNC Symbol;Acc:1476]

Gene Synonyms

CANP, CANP1, CANPL1, muCANP, muCL

Location

Chromosome 11: 64,948,037-64,979,477 forward strand.

GRCh37:CM000673.1

About this gene

This gene has 28 transcripts (splice variants), 13 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000527323.1	CAPN1-004	3086	714aa	ENSP00000431984.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44644	E9PIA9 E9PJA6 E9PJJ3 E9PLC9 E9PLX0 E9PMC6 E9PQB3 E9PSA6 P07384	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000533820.1	CAPN1-001	3083	714aa	ENSP00000435272.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44644	E9PIA9 E9PJA6 E9PJJ3 E9PLC9 E9PLX0 E9PMC6 E9PQB3 E9PSA6 P07384	NM_001198868.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000279247.6	CAPN1-003	3007	714aa	ENSP00000279247.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44644	E9PIA9 E9PJA6 E9PJJ3 E9PLC9 E9PLX0 E9PMC6 E9PQB3 E9PSA6 P07384	NM_005186.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000524773.1	CAPN1-002	2960	714aa	ENSP00000434176.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44644	E9PIA9 E9PJA6 E9PJJ3 E9PLC9 E9PLX0 E9PMC6 E9PQB3 E9PSA6 P07384	NM_001198869.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000533129.1	CAPN1-028	2792	714aa	ENSP00000431686.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44644	E9PIA9 E9PJA6 E9PJJ3 E9PLC9 E9PLX0 E9PMC6 E9PQB3 E9PSA6 P07384	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000526468.1	CAPN1-015	690	191aa	ENSP00000433366.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PL37	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000529133.1	CAPN1-027	593	191aa	ENSP00000432512.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIA9 E9PJA6 E9PJJ3 E9PLC9 E9PLX0 E9PMC6 E9PQB3 E9PSA6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000527739.1	CAPN1-009	582	161aa	ENSP00000433823.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIA9 E9PJA6 E9PJJ3 E9PLC9 E9PLX0 E9PMC6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000534373.1	CAPN1-010	581	135aa	ENSP00000431793.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIA9 E9PJJ3 E9PLX0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000533909.1	CAPN1-029	573	148aa	ENSP00000435198.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIA9 E9PJJ3 E9PLC9 E9PLX0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000528396.1	CAPN1-026	571	163aa	ENSP00000435847.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIA9 E9PJA6 E9PJJ3 E9PLC9 E9PLX0 E9PMC6 E9PSA6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000532285.1	CAPN1-011	568	63aa	ENSP00000436693.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIA9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000527699.1	CAPN1-013	564	152aa	ENSP00000431172.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIA9 E9PJJ3 E9PLC9 E9PLX0 E9PMC6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000526966.1	CAPN1-017	550	161aa	ENSP00000431528.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIA9 E9PJA6 E9PJJ3 E9PLC9 E9PLX0 E9PMC6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000531068.1	CAPN1-012	496	122aa	ENSP00000435092.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIA9 E9PLX0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000526954.1	CAPN1-021	754	201aa	ENSP00000436002.1	Nonsense mediated decay		E9PIA9 E9PJA6 E9PJJ3 E9PLC9 E9PLX0 E9PMC6 E9PQB3 E9PRM1 E9PSA6	-	-
ENST00000527469.1	CAPN1-020	584	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000530495.1	CAPN1-025	572	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000527189.1	CAPN1-019	558	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000528739.1	CAPN1-032	341	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000528165.1	CAPN1-007	2828	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530567.1	CAPN1-008	1415	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000527897.1	CAPN1-006	879	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533079.1	CAPN1-022	878	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000525013.1	CAPN1-023	643	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533704.1	CAPN1-024	643	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530442.1	CAPN1-014	577	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000527887.1	CAPN1-016	348	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Gene: CAPN1 ENSG00000014216

Summary