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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CHRNA6 ENSG00000147434

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Description

cholinergic receptor, nicotinic, alpha 6 (neuronal) [Source:HGNC Symbol;Acc:15963]

Gene Synonyms

CHNRA6

Location

Chromosome 8: 42,607,763-42,651,535 reverse strand.

GRCh37:CM000670.1

About this gene

This gene has 5 transcripts (splice variants) and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000276410.2	CHRNA6-001	2400	494aa	ENSP00000276410.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6135	E9PP97 Q15825	NM_004198.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000534622.1	CHRNA6-004	1872	479aa	ENSP00000433871.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56536	Q15825	NM_001199279.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000533810.1	CHRNA6-005	551	111aa	ENSP00000434659.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PP97	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000530869.1	CHRNA6-003	608	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000529467.1	CHRNA6-002	529	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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